Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899669.1_cds_XP_016449682.1_44207
CDS Infomation

[gene=LOC107774607] [db_xref=GeneID:107774607] [protein=factor of DNA methylation 1-like] [protein_id=XP_016449682.1] [location=join(76200..77091,77467..77648,77885..77974,78617..78904,79041..79259,79839..80066)] [gbkey=CDS]
Sequence

ATGAGCAGCTCAGATGAGGAATCAGATTTCAGTGATTCTGAGATTAATGATTATATAGAG
AAACCTTATCAAGAACTGAGAACTGGAAAATACAAAGTGAAGGGTCCAAATGGGTCTCTC
AGATGCCCCTTTTGTGCTGGGAGGAAGAAGCAAGATTACAAATACAAGGAACTCCTTCAA
CATGCTTCTGGTGCAGGTAAAGGTGCTCGTTTAGGTGCAAAACAAAAAGCAAACCACTTG
GCACTTGCAATGTACTTGGAATCTGACCTAGCTAATGAGGCTGAGCCAGTACCCCCACGT
GCTGTCACACCAGAGCGCACAGAAGCCGAGCAAACAGAAGTATTTTGCTGGCCTTGGACT
GCAGTTGTTGTCAATATGTCAAAAGAAACAGCAGATGGAGAATCTGTGGACAACAAGGAG
TATTGGTTAAAAAAATTCTCCTTGTATAAGCCCTTGGAAATTATGCTTTTCCATGATAAC
CAAGTGCTGGTGTCTGAAGCTATTGTGACTTTTGATAGGAATTGGACTGGTTTCAATAAT
GCAATGGAATTTGAGAAATCCTTTGAAGCTAGGCGCTGCAGTAAAAAGGAATGGTGTGCC
CATAAAAGTTGCCCCAGTTCAAATATTTATGGATGGGTTGCTCGGGAAGATGATTTTAGA
GCAGAAGGGGCAATAGGAGAATACCTCCGTGGAAAGGGGGAGTTAAAGACTATATCTGAC
CTGATCAAGGAAGAAACCCAGGATAGGAATAAGGTTGTAGCTACTCTAGCTAACGAGATT
GATATGGAAAATGAAAATCTGGATGAGCTGCAGATACAGTTCAATTTAAAGACGTTGTCT
CTTAGGCAGATGCTTGAGGAGAAAGACATACTACATCGTTCTTTCTTTGAAGAAACAAGG
AAGATGCAACGCCTTGCACGGGAGCATGTACAGAAGGTCCTACATGAGCAGGAGATGTTA
AGTGTTGAACTGGAGAGGAAGAAGAAGCAGCTAGATATTTGGAGCAGAGAATTGAACAAA
CGTGAGACCTTAACTGAAAGAGAAAAGCAAAAGCTGGATGAGGAGAAGCAAAAGAATGAC
GTAAGAAACTCAGCACTTCAAATGGCCTCTGCAGAACAAAGGAAAGCTGATGAGAATGTG
TTGAGACTAGTTGAAGAACATAAGAGAGAGAAGGAGGAAGCTTTGAGAAAGATACTTGAG
CTAGAAAGAGAGAATGATACCAAGCAGAAGCTGGAAATGGAAATTGCAGAACTTAAAGGA
AAACTAGAAGTTATGAAGCATCTAGGAGGTGACGACGATGCAGCTGTGCAAAATAAAATC
AAGGAGATGAACGAGGAGCTGGTTGGGAAAATGGAAGAAATGGACGACTTGGAATCCTTG
AATCAAACCCTTCTAGCGAAGGAGCGCAGGAGTAATGATGAGCTACAAGATGCTCGGCGC
ACGTTAATTACGGGATTGAATGAGCTCTTGACCAGCGGGCGCTCCCATATTGGGATAAGA
AGAATGGGGGAAATCGATTCAAAAGCATTTCAGAATGCATGCAAGCAAAGGTTCCCAAAT
GAGGAAGCTGAGATCAAGGCTTTAGAACTGTGTTCTCTTTGGCAGGAAAAAATAAAAGAC
TCTGATTGGCATCCATTTAAAACTTTCATGGTTGACGAGTCCAAGGCTGAGAAAGTGATT
GATGAGAATGATGAAGCTCTAAAAAAGCTCAAGGAGGAATGGGGGGATGAAATTTACAAT
GCGGTAACTGAAGCTCTAAAGGAGATTGAGGAATACAATCCCAGTGGCAGATATGTGATC
CCTGAGCTGTGGAATTTCAAGGAACAAAGGAAGGCTACACTAAAGGAAGCAATCAGCTTC
ATTTTCAAGCAATTAAAGACACATAAGAGGAAGAGATGA

Peptide Sequence

PEP ID

XP_016449682.1
PEP Infomation

PREDICTED: factor of DNA methylation 1-like [Nicotiana tabacum]
Sequence

MSSSDEESDFSDSEINDYIEKPYQELRTGKYKVKGPNGSLRCPFCAGRKKQDYKYKELLQ
HASGAGKGARLGAKQKANHLALAMYLESDLANEAEPVPPRAVTPERTEAEQTEVFCWPWT
AVVVNMSKETADGESVDNKEYWLKKFSLYKPLEIMLFHDNQVLVSEAIVTFDRNWTGFNN
AMEFEKSFEARRCSKKEWCAHKSCPSSNIYGWVAREDDFRAEGAIGEYLRGKGELKTISD
LIKEETQDRNKVVATLANEIDMENENLDELQIQFNLKTLSLRQMLEEKDILHRSFFEETR
KMQRLAREHVQKVLHEQEMLSVELERKKKQLDIWSRELNKRETLTEREKQKLDEEKQKND
VRNSALQMASAEQRKADENVLRLVEEHKREKEEALRKILELERENDTKQKLEMEIAELKG
KLEVMKHLGGDDDAAVQNKIKEMNEELVGKMEEMDDLESLNQTLLAKERRSNDELQDARR
TLITGLNELLTSGRSHIGIRRMGEIDSKAFQNACKQRFPNEEAEIKALELCSLWQEKIKD
SDWHPFKTFMVDESKAEKVIDENDEALKKLKEEWGDEIYNAVTEALKEIEEYNPSGRYVI
PELWNFKEQRKATLKEAISFIFKQLKTHKRKR

Transcript Sequence

Gene sequence data has not been registered.